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https://aws.amazon.com/getting-started/hands-on/run-batch-jobs-at-scale-with-ec2-spot/
Have a look at above link. At step 1.6 you should be able to select prefered instance type as your docker image is very large. Also check the instance default EBS volume size.
"You can add additional instance families or specific types, including GPU instance families (P2 and P3) if your jobs require it; AWS Batch will pick the optimal set of instances based on your jobs’ requirements, while benefiting from the 90% discount Spot Instances offer over On-Demand pricing."
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