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Glue at the moment supports UTF-8 encoded files only [1]. If UTF-16 files are passed in, you may encounter the "Internal Service Exception" error message. The most feasible method would be to programatically convert the utf-16 files to utf-8 before passing it through Glue Crawler.
[1] - https://docs.aws.amazon.com/glue/latest/dg/components-key-concepts.html
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