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Amazon FSx for Windows File Server provides a native backup feature that you can use to create backups of your file system. However, these backups are not instant, and you have to schedule them or create them manually.
Please review the following link
https://docs.aws.amazon.com/fsx/latest/WindowsGuide/using-backups.html
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Your best option is going to be leveraging VSS to get version of files in FSx. https://docs.aws.amazon.com/fsx/latest/WindowsGuide/shadow-copies-fsxW.html
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Amazon FSx for Windows File Server, a service that provides fully managed native Microsoft Windows file systems, now enables end-users to easily view and restore previous versions of files using Windows shadow copies. You can restore it by going to properties of mount path and select previous version
https://docs.aws.amazon.com/fsx/latest/WindowsGuide/shadow-copies-fsxW.html