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CloudShell is a browser-based, pre-authenticated shell that you can launch directly from the AWS Management Console. You must have used it in the past. When you run it, you are provided with a persistent storage of 1GB for each AWS Region at no cost. Persistent storage is located in your home directory ($HOME) and is private to you. If you stop using AWS CloudShell in an AWS Region, data is retained in the persistent storage of that Region for 120 days after the end of your last session. After 120 days unless you take action, your data will be automatically deleted from the persistent storage of that Region. You can prevent removal by simply launching AWS CloudShell again in that AWS Region.
You will not lose your Lightsail data. These are two different things.
Just to supplement the answer from @AWS-User-alantam the question that you have is addressed in the FAQ for CloudShell (just in case you get asked about it in future, or need an "official" statement from AWS) https://aws.amazon.com/cloudshell/faqs/#Limits_.26_usage
Q: How can I prevent my CloudShell storage from being deleted?
Sign in to the AWS Management Console and open CloudShell in the expiring Region. This will reset the time associated with your storage in the given Region.
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Thanks for the prompt reply. And thanks for calming my paranoia about my Lightsail account.