This is a very Eclipse centric question and I am not sure AWS would be able to answer it.
That being said, esp-idf comes with idf.py utility (you just need to reference the right path and env variables).
The idf.py file gives you the ability to interact with the device build, flash, monitor etc. Consult the Eclipse documentation to reference this utility and build directly from the IDE or just invoke it from the terminal.
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